A Bayesian approach for detecting a disease that is not being modeled.
Identifieur interne : 000A53 ( Main/Exploration ); précédent : 000A52; suivant : 000A54A Bayesian approach for detecting a disease that is not being modeled.
Auteurs : John M. Aronis [États-Unis] ; Jeffrey P. Ferraro [États-Unis] ; Per H. Gesteland [États-Unis] ; Fuchiang Tsui [États-Unis] ; Ye Ye [États-Unis] ; Michael M. Wagner [États-Unis] ; Gregory F. Cooper [États-Unis]Source :
- PloS one [ 1932-6203 ] ; 2020.
Abstract
Over the past decade, outbreaks of new or reemergent viruses such as severe acute respiratory syndrome (SARS) virus, Middle East respiratory syndrome (MERS) virus, and Zika have claimed thousands of lives and cost governments and healthcare systems billions of dollars. Because the appearance of new or transformed diseases is likely to continue, the detection and characterization of emergent diseases is an important problem. We describe a Bayesian statistical model that can detect and characterize previously unknown and unmodeled diseases from patient-care reports and evaluate its performance on historical data.
DOI: 10.1371/journal.pone.0229658
PubMed: 32109254
Affiliations:
Links toward previous steps (curation, corpus...)
- to stream PubMed, to step Corpus: 000729
- to stream PubMed, to step Curation: 000729
- to stream PubMed, to step Checkpoint: 000838
- to stream Ncbi, to step Merge: 003251
- to stream Ncbi, to step Curation: 003251
- to stream Ncbi, to step Checkpoint: 003251
- to stream Main, to step Merge: 000A53
- to stream Main, to step Curation: 000A53
Le document en format XML
<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en">A Bayesian approach for detecting a disease that is not being modeled.</title>
<author><name sortKey="Aronis, John M" sort="Aronis, John M" uniqKey="Aronis J" first="John M" last="Aronis">John M. Aronis</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
<author><name sortKey="Ferraro, Jeffrey P" sort="Ferraro, Jeffrey P" uniqKey="Ferraro J" first="Jeffrey P" last="Ferraro">Jeffrey P. Ferraro</name>
<affiliation wicri:level="2"><nlm:affiliation>Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah</wicri:regionArea>
<placeName><region type="state">Utah</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Gesteland, Per H" sort="Gesteland, Per H" uniqKey="Gesteland P" first="Per H" last="Gesteland">Per H. Gesteland</name>
<affiliation wicri:level="2"><nlm:affiliation>Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah</wicri:regionArea>
<placeName><region type="state">Utah</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Tsui, Fuchiang" sort="Tsui, Fuchiang" uniqKey="Tsui F" first="Fuchiang" last="Tsui">Fuchiang Tsui</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
<author><name sortKey="Ye, Ye" sort="Ye, Ye" uniqKey="Ye Y" first="Ye" last="Ye">Ye Ye</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
<author><name sortKey="Wagner, Michael M" sort="Wagner, Michael M" uniqKey="Wagner M" first="Michael M" last="Wagner">Michael M. Wagner</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
<author><name sortKey="Cooper, Gregory F" sort="Cooper, Gregory F" uniqKey="Cooper G" first="Gregory F" last="Cooper">Gregory F. Cooper</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">PubMed</idno>
<date when="2020">2020</date>
<idno type="RBID">pubmed:32109254</idno>
<idno type="pmid">32109254</idno>
<idno type="doi">10.1371/journal.pone.0229658</idno>
<idno type="wicri:Area/PubMed/Corpus">000729</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Corpus" wicri:corpus="PubMed">000729</idno>
<idno type="wicri:Area/PubMed/Curation">000729</idno>
<idno type="wicri:explorRef" wicri:stream="PubMed" wicri:step="Curation">000729</idno>
<idno type="wicri:Area/PubMed/Checkpoint">000838</idno>
<idno type="wicri:explorRef" wicri:stream="Checkpoint" wicri:step="PubMed">000838</idno>
<idno type="wicri:Area/Ncbi/Merge">003251</idno>
<idno type="wicri:Area/Ncbi/Curation">003251</idno>
<idno type="wicri:Area/Ncbi/Checkpoint">003251</idno>
<idno type="wicri:Area/Main/Merge">000A53</idno>
<idno type="wicri:Area/Main/Curation">000A53</idno>
<idno type="wicri:Area/Main/Exploration">000A53</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en">A Bayesian approach for detecting a disease that is not being modeled.</title>
<author><name sortKey="Aronis, John M" sort="Aronis, John M" uniqKey="Aronis J" first="John M" last="Aronis">John M. Aronis</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
<author><name sortKey="Ferraro, Jeffrey P" sort="Ferraro, Jeffrey P" uniqKey="Ferraro J" first="Jeffrey P" last="Ferraro">Jeffrey P. Ferraro</name>
<affiliation wicri:level="2"><nlm:affiliation>Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah</wicri:regionArea>
<placeName><region type="state">Utah</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Gesteland, Per H" sort="Gesteland, Per H" uniqKey="Gesteland P" first="Per H" last="Gesteland">Per H. Gesteland</name>
<affiliation wicri:level="2"><nlm:affiliation>Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Department of Biomedical Informatics, University of Utah, Salt Lake City, Utah</wicri:regionArea>
<placeName><region type="state">Utah</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Tsui, Fuchiang" sort="Tsui, Fuchiang" uniqKey="Tsui F" first="Fuchiang" last="Tsui">Fuchiang Tsui</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
<author><name sortKey="Ye, Ye" sort="Ye, Ye" uniqKey="Ye Y" first="Ye" last="Ye">Ye Ye</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
<author><name sortKey="Wagner, Michael M" sort="Wagner, Michael M" uniqKey="Wagner M" first="Michael M" last="Wagner">Michael M. Wagner</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
<author><name sortKey="Cooper, Gregory F" sort="Cooper, Gregory F" uniqKey="Cooper G" first="Gregory F" last="Cooper">Gregory F. Cooper</name>
<affiliation wicri:level="4"><nlm:affiliation>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania, United States of America.</nlm:affiliation>
<country xml:lang="fr">États-Unis</country>
<wicri:regionArea>Real-time Outbreak and Disease Surveillance (RODS) Laboratory, Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, Pennsylvania</wicri:regionArea>
<placeName><region type="state">Pennsylvanie</region>
<settlement type="city">Pittsburgh</settlement>
</placeName>
<orgName type="university">Université de Pittsburgh</orgName>
</affiliation>
</author>
</analytic>
<series><title level="j">PloS one</title>
<idno type="eISSN">1932-6203</idno>
<imprint><date when="2020" type="published">2020</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
</fileDesc>
<profileDesc><textClass></textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Over the past decade, outbreaks of new or reemergent viruses such as severe acute respiratory syndrome (SARS) virus, Middle East respiratory syndrome (MERS) virus, and Zika have claimed thousands of lives and cost governments and healthcare systems billions of dollars. Because the appearance of new or transformed diseases is likely to continue, the detection and characterization of emergent diseases is an important problem. We describe a Bayesian statistical model that can detect and characterize previously unknown and unmodeled diseases from patient-care reports and evaluate its performance on historical data.</div>
</front>
</TEI>
<affiliations><list><country><li>États-Unis</li>
</country>
<region><li>Pennsylvanie</li>
<li>Utah</li>
</region>
<settlement><li>Pittsburgh</li>
</settlement>
<orgName><li>Université de Pittsburgh</li>
</orgName>
</list>
<tree><country name="États-Unis"><region name="Pennsylvanie"><name sortKey="Aronis, John M" sort="Aronis, John M" uniqKey="Aronis J" first="John M" last="Aronis">John M. Aronis</name>
</region>
<name sortKey="Cooper, Gregory F" sort="Cooper, Gregory F" uniqKey="Cooper G" first="Gregory F" last="Cooper">Gregory F. Cooper</name>
<name sortKey="Ferraro, Jeffrey P" sort="Ferraro, Jeffrey P" uniqKey="Ferraro J" first="Jeffrey P" last="Ferraro">Jeffrey P. Ferraro</name>
<name sortKey="Gesteland, Per H" sort="Gesteland, Per H" uniqKey="Gesteland P" first="Per H" last="Gesteland">Per H. Gesteland</name>
<name sortKey="Tsui, Fuchiang" sort="Tsui, Fuchiang" uniqKey="Tsui F" first="Fuchiang" last="Tsui">Fuchiang Tsui</name>
<name sortKey="Wagner, Michael M" sort="Wagner, Michael M" uniqKey="Wagner M" first="Michael M" last="Wagner">Michael M. Wagner</name>
<name sortKey="Ye, Ye" sort="Ye, Ye" uniqKey="Ye Y" first="Ye" last="Ye">Ye Ye</name>
</country>
</tree>
</affiliations>
</record>
Pour manipuler ce document sous Unix (Dilib)
EXPLOR_STEP=$WICRI_ROOT/Sante/explor/SrasV1/Data/Main/Exploration
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000A53 | SxmlIndent | more
Ou
HfdSelect -h $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd -nk 000A53 | SxmlIndent | more
Pour mettre un lien sur cette page dans le réseau Wicri
{{Explor lien |wiki= Sante |area= SrasV1 |flux= Main |étape= Exploration |type= RBID |clé= pubmed:32109254 |texte= A Bayesian approach for detecting a disease that is not being modeled. }}
Pour générer des pages wiki
HfdIndexSelect -h $EXPLOR_AREA/Data/Main/Exploration/RBID.i -Sk "pubmed:32109254" \ | HfdSelect -Kh $EXPLOR_AREA/Data/Main/Exploration/biblio.hfd \ | NlmPubMed2Wicri -a SrasV1
This area was generated with Dilib version V0.6.33. |